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SRX6440642: 16S barcoding of whole planorbid snail bacterial communities
1 ILLUMINA (Illumina MiSeq) run: 49,395 spots, 24.7M bases, 14.6Mb downloads

Design: total DNA from sample - 16S V3V4 amplicon sequencing for bacterial communities
Submitted by: University of Perpignan Via Domitia
Study: Bacterial Microbiota of Planorbidae snails
show Abstracthide Abstract
Planorbidae snails are molluscs of health importance as they are intermediate hosts for trematode parasite of the Schistososma genus that are responsible of bilharzia, a disease affecting notably humans and cattle. Here we aimed at characterizing the microbiota composition of several Planorbidae species and strains to better understand which factors shape their bacterial communities. Individual snail microbiota was determined using 16S rDNA amplicon sequencing on 12 individuals of Biomphalaria glabrata (strains BAR2, BRE2, GH2, BS90), Biomphalaria pgeifferi, Planorbarisu metidjensis, Bulinus truncatus).
Sample: B. gla GUA 10
SAMN12273378 • SRS5094647 • All experiments • All runs
Library:
Name: GUA14
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 49,395 spots, 24.7M bases, 14.6Mb
Run# of Spots# of BasesSizePublished
SRR968029049,39524.7M14.6Mb2020-01-23

ID:
8536036

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